NFcore::Complex Class Reference

#include <NFcore.hh>

List of all members.

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Detailed Description

Container to dynamically keep track of all system complexes.

Author:

Michael Sneddon

Public Member Functions
	Complex (System *s, int ID_complex, Molecule *m)
	~Complex ()
bool	isAlive ()
int	getComplexID () const
int	getComplexSize () const
int	getMoleculeCountOfType (MoleculeType *m)
void	mergeWithList (Complex *c)
void	updateComplexMembership (Molecule *m)
void	refactorToNewComplex (int new_ID_complex)
void	emptyComplexForever ()
void	printDegreeDistribution ()
void	getDegreeDistribution (vector< int > &degreeDist)
void	printDetails ()
void	printDetailsLong ()
double	getDistance (Complex *c)
double	getXpos ()
double	getYpos ()
double	getZpos ()
Public Attributes
list< Molecule * >	complexMembers
list< Molecule * >::iterator	molIter
Static Public Attributes
static const int	UNIFORM = 0
static const int	FIXED_POINT = 1
static const int	DIFFUSE_3D = 2
Protected Attributes
System *	system
int	ID_complex

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Constructor & Destructor Documentation

Complex::Complex	(	System *	s,
		int	ID_complex,
		Molecule *	m
	)

Complex::~Complex

(

)

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Member Function Documentation

bool Complex::isAlive

(

)

int NFcore::Complex::getComplexID

(

)

const [inline]

int NFcore::Complex::getComplexSize

(

)

const [inline]

int Complex::getMoleculeCountOfType

(

MoleculeType *

m

)

void Complex::mergeWithList

(

Complex *

c

)

void Complex::updateComplexMembership

(

Molecule *

m

)

void Complex::refactorToNewComplex

(

int

new_ID_complex

)

void NFcore::Complex::emptyComplexForever

(

)

[inline]

void Complex::printDegreeDistribution

(

)

void Complex::getDegreeDistribution

(

vector< int > &

degreeDist

)

void Complex::printDetails

(

)

void Complex::printDetailsLong

(

)

double NFcore::Complex::getDistance

(

Complex *

c

)

[inline]

double NFcore::Complex::getXpos

(

)

[inline]

double NFcore::Complex::getYpos

(

)

[inline]

double NFcore::Complex::getZpos

(

)

[inline]

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Member Data Documentation

const int NFcore::Complex::UNIFORM = 0 [static]

const int NFcore::Complex::FIXED_POINT = 1 [static]

const int NFcore::Complex::DIFFUSE_3D = 2 [static]

list<Molecule *> NFcore::Complex::complexMembers

list<Molecule *>::iterator NFcore::Complex::molIter

System* NFcore::Complex::system [protected]

int NFcore::Complex::ID_complex [protected]

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The documentation for this class was generated from the following files:

• /home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/NFcore.hh
• /home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/complex.cpp

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