NFsim File List

Here is a list of all files with brief descriptions:

/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFsim.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFsim.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/complex.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/complexList.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/molecule.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/moleculeType.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/NFcore.hh [code]	Contains declarations of core NFsim classes
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/observable.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/observable.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/reactionClass.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/system.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/templateMolecule.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/templateMolecule.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/moleculeLists/moleculeList.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/moleculeLists/moleculeList.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/reactionSelector/directSelector.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/reactionSelector/logClassSelector.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/reactionSelector/reactionSelector.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFfunction/compositeFunction.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFfunction/funcParser.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFfunction/function.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFfunction/localFunction.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFfunction/NFfunction.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/commandLineParser.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/NFinput.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/NFinput.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/parseFuncXML.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/parseSymRxns.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/rnfRunner.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/walk.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/TinyXML/tinystr.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/TinyXML/tinystr.h [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/TinyXML/tinyxml.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/TinyXML/tinyxml.h [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/TinyXML/tinyxmlerror.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFinput/TinyXML/tinyxmlparser.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFoutput/NFoutput.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFoutput/NFoutput.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/NFreactions.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/NFreactions.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/mappings/mapping.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/mappings/mapping.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/mappings/mappingGenerator.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/mappings/mappingGenerator.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/mappings/mappingSet.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/mappings/mappingSet.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/reactantLists/reactantContainer.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/reactantLists/reactantList.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/reactantLists/reactantList.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/reactantLists/reactantTree.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/reactantLists/reactantTree.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/reactions/DORreaction.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/reactions/reaction.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/reactions/reaction.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/transformations/speciesCreator.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/transformations/speciesCreator.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/transformations/transformation.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/transformations/transformation.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/transformations/transformationSet.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFreactions/transformations/transformationSet.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFscheduler/NFstream.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFscheduler/NFstream.h [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFscheduler/Scheduler.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFscheduler/Scheduler.h [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/agentcell/agentcell.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/agentcell/agentcell.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/agentcell/cell/cell.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/agentcell/cell/cell.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/agentcell/cell/environment.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/agentcell/cell/environment.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/agentcell/cell/util.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/agentcell/cell/util.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/simple_system/simple_system.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/simple_system/simple_system.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/tlbr/tlbr.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/tlbr/tlbr.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/transcription/transcription.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFtest/transcription/transcription.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFutil/conversion.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFutil/NFutil.hh [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFutil/random.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFutil/stringOperations.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFutil/MTrand/mtrand.cpp
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFutil/MTrand/mtrand.h [code]
/home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFutil/MTrand/mttest.cpp

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