NFcore::ComplexList Class Reference

#include <NFcore.hh>

List of all members.

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Detailed Description

Container to organize all system complexes.

Author:

Justin Hogg

Public Member Functions
	ComplexList ()
	~ComplexList ()
bool	isUsingComplex () const
void	setUseComplex (bool _useComplex)
void	setSystem (System *_sys)
int	createComplex (Molecule *m)
Complex *	getComplex (int ID_complex) const
Complex *	getNextAvailableComplex ()
void	notifyThatComplexIsAvailable (int ID_complex)
void	printAllComplexes ()
void	purgeAndPrintAvailableComplexList ()
void	outputComplexSizes (double cSampleTime)
void	outputMoleculeTypeCountPerComplex (MoleculeType *m)
double	outputMeanCount (MoleculeType *m)
double	calculateMeanCount (MoleculeType *m)
void	resetComplexIter ()
Complex *	nextComplex ()
Protected Attributes
vector< Complex * >	allComplexes
queue< int >	nextAvailableComplex
System *	sys
bool	useComplex

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Constructor & Destructor Documentation

ComplexList::ComplexList

(

)

ComplexList::~ComplexList

(

)

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Member Function Documentation

bool NFcore::ComplexList::isUsingComplex

(

)

const [inline]

void NFcore::ComplexList::setUseComplex

(

bool

_useComplex

)

[inline]

void NFcore::ComplexList::setSystem

(

System *

_sys

)

[inline]

int ComplexList::createComplex

(

Molecule *

m

)

Complex* NFcore::ComplexList::getComplex

(

int

ID_complex

)

const [inline]

Complex * ComplexList::getNextAvailableComplex

(

)

void ComplexList::notifyThatComplexIsAvailable

(

int

ID_complex

)

void ComplexList::printAllComplexes

(

)

void ComplexList::purgeAndPrintAvailableComplexList

(

)

void ComplexList::outputComplexSizes

(

double

cSampleTime

)

void ComplexList::outputMoleculeTypeCountPerComplex

(

MoleculeType *

m

)

double ComplexList::outputMeanCount

(

MoleculeType *

m

)

double ComplexList::calculateMeanCount

(

MoleculeType *

m

)

void NFcore::ComplexList::resetComplexIter

(

)

[inline]

Complex* NFcore::ComplexList::nextComplex

(

)

[inline]

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Member Data Documentation

vector<Complex * > NFcore::ComplexList::allComplexes [protected]

container of all complexes in the simulation

queue<int> NFcore::ComplexList::nextAvailableComplex [protected]

queue tells us which complexes can be used next

System* NFcore::ComplexList::sys [protected]

bool NFcore::ComplexList::useComplex [protected]

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The documentation for this class was generated from the following files:

• /home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/NFcore.hh
• /home/msneddon/eclipse/galileoSR1_cpp/workspace/NFsim/src/NFcore/complexList.cpp

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