NFtest_tlbr Namespace Reference

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Detailed Description

Tests for running the TLBR system.

Author:

Michael Sneddon

Functions
void	run (map< string, string > &argMap)
void	runSystem (int n_L, int n_R, double cTot, double beta, double koff, string outputFileName, double simTime, double dt, bool outputObservables, bool outputAvg, bool outputFinalDist)
MoleculeType *	createL (System *s, int count)
MoleculeType *	createR (System *s, int count)
void	createFreeBindingRxns (System *s, MoleculeType *L, MoleculeType *R, double rate)
void	createUnbindingRxns (System *s, MoleculeType *R, double rate)
void	createCrossLinkingRxns (System *s, MoleculeType *L, MoleculeType *R, double rate)

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Function Documentation

void NFtest_tlbr::createCrossLinkingRxns	(	System *	s,
		MoleculeType *	L,
		MoleculeType *	R,
		double	rate
	)

void NFtest_tlbr::createFreeBindingRxns	(	System *	s,
		MoleculeType *	L,
		MoleculeType *	R,
		double	rate
	)

MoleculeType * NFtest_tlbr::createL	(	System *	s,
		int	count
	)

MoleculeType * NFtest_tlbr::createR	(	System *	s,
		int	count
	)

void NFtest_tlbr::createUnbindingRxns	(	System *	s,
		MoleculeType *	R,
		double	rate
	)

void NFtest_tlbr::run

(

map< string, string > &

argMap

)

void NFtest_tlbr::runSystem	(	int	n_L,
		int	n_R,
		double	cTot,
		double	beta,
		double	koff,
		string	outputFileName,
		double	simTime,
		double	dt,
		bool	outputObservables,
		bool	outputAvg,
		bool	outputFinalDist
	)

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