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Here is a list of all namespace members with links to the namespace documentation for each member:
- a -
addObs() :
NFtest_ss
,
NFtest_transcription
applyDisplacement() :
ChemotaxisUtil
applyRotation() :
ChemotaxisUtil
- c -
convertToDouble() :
NFutil
convertToInt() :
NFutil
createCrossLinkingRxns() :
NFtest_tlbr
createFreeBindingRxns() :
NFtest_tlbr
createL() :
NFtest_tlbr
createR() :
NFtest_tlbr
createReactionRNAdegrades() :
NFtest_transcription
createReactionRNAtranscribed() :
NFtest_transcription
createReactionXDephos() :
NFtest_ss
createReactionXYbind() :
NFtest_ss
createReactionXYunbind() :
NFtest_ss
createReactionYphosX() :
NFtest_ss
createRNA() :
NFtest_transcription
createSystemDumper() :
NFinput
createUnbindingRxns() :
NFtest_tlbr
createX() :
NFtest_ss
createY() :
NFtest_ss
- f -
FindReactionRuleSymmetry() :
NFinput
- g -
generateRxnPermutations() :
NFinput
genRot3dAboutAxis() :
ChemotaxisUtil
genRotFromAngles() :
ChemotaxisUtil
genUniformRandRotation3d() :
ChemotaxisUtil
- i -
initFunctions() :
NFinput
initializeFromXML() :
NFinput
initMoleculeTypes() :
NFinput
initObservables() :
NFinput
initParameters() :
NFinput
initReactionRules() :
NFinput
initStartSpecies() :
NFinput
- l -
lookup() :
NFinput
- n -
NA :
NFutil
- p -
parseArguments() :
NFinput
parseAsCommaSeparatedSequence() :
NFinput
parseAsDouble() :
NFinput
parseAsInt() :
NFinput
parseSequence() :
NFinput
PI :
NFutil
- r -
RANDOM() :
NFutil
RANDOM_CLOSED() :
NFutil
RANDOM_GAUSSIAN() :
NFutil
RANDOM_INT() :
NFutil
readObservableForTemplateMolecules() :
NFinput
readPattern() :
NFinput
readPatternForSymmetry() :
NFinput
readProductPattern() :
NFinput
readRNFfile() :
NFinput
run() :
NFtest_transcription
,
NFtest_ss
,
NFtest_tlbr
runRNFcommands() :
NFinput
runSystem() :
NFtest_tlbr
- s -
SEED_RANDOM() :
NFutil
- t -
test() :
NFcore
test_simple() :
NFcore
test_tree() :
NFcore
toString() :
NFutil
trim() :
NFutil
- w -
walk() :
NFinput
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