Here is a list of all class members with links to the classes they belong to:
- GammaSampler()
: ChemotaxisUtil::GammaSampler
- gen()
: ChemotaxisUtil::GammaSampler
- genAddMoleculeTransform()
: NFcore::TransformationFactory
- genBindingSeparateComplexTransform1()
: NFcore::TransformationFactory
- genBindingTransform1()
: NFcore::TransformationFactory
- genBindingTransform2()
: NFcore::TransformationFactory
- genDecrementStateTransform()
: NFcore::TransformationFactory
- genDefaultMolecule()
: NFcore::MoleculeType
- genEmptyTransform()
: NFcore::TransformationFactory
- generateBlankMappingSet()
: NFcore::TransformationSet
- genIncrementStateTransform()
: NFcore::TransformationFactory
- genLocalFunctionReference()
: NFcore::TransformationFactory
- genRemoveMoleculeTransform()
: NFcore::TransformationFactory
- genStateChangeTransform()
: NFcore::TransformationFactory
- genUnbindingTransform()
: NFcore::TransformationFactory
- get()
: NFcore::MappingSet
- get_a()
: NFcore::ReactionClass
- get_A_tot()
: NFcore::System
- getAllComplexes()
: NFcore::System
- getArgName()
: NFcore::CompositeFunction
- getAtot()
: NFcore::ReactionSelector
, NFcore::DirectSelector
, NFcore::LogClassSelector
- getAverageGroupValue()
: NFcore::System
- getBaseRate()
: NFcore::ReactionClass
- getBondedMolecule()
: NFcore::Molecule
- getBondedMoleculeBindingSiteIndex()
: NFcore::Molecule
- GetChar()
: TiXmlBase
- getClonedMapping()
: NFcore::MappingSet
- getCompIndexFromName()
: NFcore::MoleculeType
- getComplex()
: NFcore::ComplexList
, NFcore::Molecule
- getComplexID()
: NFcore::Molecule
, NFcore::Complex
- getComplexSize()
: NFcore::Complex
- getComponentIndex()
: NFcore::Transformation
, NFcore::LocalFunctionReference
, NFcore::EmptyTransform
, NFcore::StateChangeTransform
, NFcore::BindingTransform
, NFcore::BindingSeparateComplexTransform
, NFcore::UnbindingTransform
, NFcore::AddMoleculeTransform
, NFcore::RemoveMoleculeTransform
, NFcore::IncrementStateTransform
, NFcore::DecrementStateTransform
- getComponentIndexOfBond()
: NFcore::Molecule
- getComponentName()
: NFcore::MoleculeType
- getComponentState()
: NFcore::Molecule
- getComponentStateName()
: NFcore::MoleculeType
- getCompositeFunctionByName()
: NFcore::System
- getCount()
: NFcore::Observable
- getCurrentTime()
: NFcore::System
- getDefaultComponentState()
: NFcore::MoleculeType
- getDegree()
: NFcore::Molecule
- getDegreeDistribution()
: NFcore::Complex
- getDepthOfTree()
: NFcore::ReactantTree
- getDistance()
: NFcore::Complex
- GetDocument()
: TiXmlNode
- getDORreactantPosition()
: NFcore::DORRxnClass
, NFcore::ReactionClass
- getDORrxn()
: NFcore::MoleculeType
- getDORrxnIndex()
: NFcore::MoleculeType
- getDORrxnPosition()
: NFcore::MoleculeType
- GetEntity()
: TiXmlBase
- getEquivalencyClass()
: NFcore::MoleculeType
- getEquivalencyClassCompNames()
: NFcore::MoleculeType
- getEquivalencyClassNumber()
: NFcore::MoleculeType
- getExpression()
: NFcore::LocalFunction
- getFunctionScope()
: NFcore::LocalFunctionReference
- getGlobalFunctionByName()
: NFcore::System
- getGlobalMoleculeLimit()
: NFcore::System
- getHasClonedMappings()
: NFcore::ReactantContainer
- getId()
: NFcore::MappingSet
- getIndex()
: NFcore::Mapping
- getLigConc()
: Environment
, ConstantEnvironment
, LinearEnvironment
- getListOfProducts()
: NFcore::TransformationSet
- getLocalFunction()
: NFcore::System
, NFcore::Molecule
- getLocalFunctionByName()
: NFcore::System
- getLocalFunctionValue()
: NFcore::Molecule
- getMappingSet()
: NFcore::ReactantContainer
, NFcore::ReactantList
, NFcore::ReactantTree
- getMolecule()
: NFcore::MoleculeType
, NFcore::Mapping
- getMoleculeByUid()
: NFcore::System
- getMoleculeCount()
: NFcore::MoleculeType
- getMoleculeCountOfType()
: NFcore::Complex
- getMoleculeType()
: NFcore::System
, NFcore::Molecule
, NFcore::TemplateMolecule
- getMoleculeTypeByName()
: NFcore::System
- getMoleculeTypeName()
: NFcore::Molecule
, NFcore::TemplateMolecule
- getMolListId()
: NFcore::Molecule
- getMolObs()
: NFcore::MoleculeType
- getMolObsCount()
: NFcore::System
, NFcore::MoleculeType
- getMolObsName()
: NFcore::MoleculeType
- getN_connectedTo()
: NFcore::TemplateMolecule
- getN_mapGenerators()
: NFcore::TemplateMolecule
- getN_symCompBonds()
: NFcore::TemplateMolecule
- getN_symComps()
: NFcore::TemplateMolecule
- getName()
: NFcore::MoleculeType
, NFcore::System
, NFcore::ReactionClass
, NFcore::Observable
, NFcore::GlobalFunction
, NFcore::LocalFunction
, NFcore::CompositeFunction
- getNextAvailableComplex()
: NFcore::ComplexList
- getNextReactionClass()
: NFcore::DirectSelector
, NFcore::ReactionSelector
, NFcore::LogClassSelector
- getNextRxn()
: NFcore::System
- getNiceName()
: NFcore::LocalFunction
, NFcore::GlobalFunction
- getNreactants()
: NFcore::TransformationSet
- getNumDisjointSets()
: NFcore::TemplateMolecule
- getNumOfArgs()
: NFcore::CompositeFunction
- getNumOfComponents()
: NFcore::MoleculeType
- getNumOfDORrxns()
: NFcore::MoleculeType
- getNumOfEquivalencyClasses()
: NFcore::MoleculeType
- getNumOfMappings()
: NFcore::MappingSet
- getNumOfMolecules()
: NFcore::System
- getNumOfMoleculeTypes()
: NFcore::System
- getNumOfMolObs()
: NFcore::MoleculeType
- getNumOfReactants()
: NFcore::ReactionClass
, NFcore::TransformationSet
- getNumOfSpeciesObs()
: NFcore::System
- getNumOfTransformations()
: NFcore::TransformationSet
- getNumOfTypeIFunctions()
: NFcore::MoleculeType
- getNumOfTypeIIFunctions()
: NFcore::MoleculeType
- getNumOfVarRefs()
: NFcore::GlobalFunction
- getObservableByName()
: NFcore::System
- getOutputFileStream()
: NFcore::System
- getParameter()
: NFcore::System
- getParsedExpression()
: NFcore::LocalFunction
- getPatternString()
: NFcore::TemplateMolecule
- getPointerName()
: NFcore::LocalFunctionReference
- getPossibleComponentStates()
: NFcore::MoleculeType
- getRateFactorSum()
: NFcore::ReactantTree
- getReactantCount()
: NFcore::DORRxnClass
, NFcore::BasicRxnClass
, NFcore::ReactionClass
- getReaction()
: NFcore::System
- getReactionCount()
: NFcore::MoleculeType
- getRemovalType()
: NFcore::Transformation
, NFcore::RemoveMoleculeTransform
- getRxnId()
: NFcore::ReactionClass
- getRxnIndex()
: NFcore::System
, NFcore::MoleculeType
- getRxnListMappingId()
: NFcore::Molecule
- getRxnType()
: NFcore::ReactionClass
- getSpeciesObs()
: NFcore::System
- getStartPosition()
: Environment
, LinearEnvironment
- getStateValueFromName()
: NFcore::MoleculeType
- getStrName()
: NFstream
- getSystem()
: NFcore::MoleculeType
- getTemplateMolecule()
: NFcore::TransformationSet
- getTemplateMoleculeList()
: NFcore::Observable
- getTemplateObject()
: NFcore::LocalFunctionReference
- GetText()
: TiXmlElement
- getTransformation()
: NFcore::TransformationSet
- getType()
: NFcore::Transformation
, NFcore::Mapping
, NFcore::Observable
- getTypeID()
: NFcore::MoleculeType
- getTypeIILocalFunction()
: NFcore::MoleculeType
- getTypeILocalFunction()
: NFcore::MoleculeType
- getUniqueID()
: NFcore::Molecule
- getUniqueIdCount()
: NFcore::Molecule
- GetUserData()
: TiXmlBase
- getValue()
: NFcore::LocalFunction
, NFcore::StateCounter
- getVarRefName()
: NFcore::GlobalFunction
- getVarRefType()
: NFcore::GlobalFunction
- getXdirection()
: AgentCell
- getXpos()
: NFcore::Complex
- getXposition()
: AgentCell
- getYdirection()
: AgentCell
- getYpos()
: NFcore::Complex
- getYposition()
: AgentCell
- getZdirection()
: AgentCell
- getZpos()
: NFcore::Complex
- getZposition()
: AgentCell
- gf
: NFcore::FunctionalRxnClass
- gfNames
: NFcore::CompositeFunction
- gfs
: NFcore::CompositeFunction
- gfValues
: NFcore::CompositeFunction
- globalEventCounter
: NFcore::System
- GlobalFunction()
: NFcore::GlobalFunction
- globalFunctions
: NFcore::System
- globalMoleculeLimit
: NFcore::System
- GREATER_THAN
: NFcore::Observable
- GREATOR_OR_EQUAL_TO
: NFcore::Observable
Generated on Thu Dec 9 11:02:48 2010 for NFsim by
1.5.4